OSU Syngenta vbi

SeedGenes Profile: EMB 1705

Gene Information
Gene Symbol EMB 1705
Chromosome Locus At5g22370   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol QQT 1 (M. Devic) Sequence Identity
QQT 1 (M. Devic) Complemetation Test
Gene Class Embryo Defective
Predicted Function GPN-Loop GTPase 2
Function Details Microtubule organization
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Border Recovery
Devic / Versailles (1 allele)
Database Release September, 2002
Predicted Sequences
Gene:2606 nucleotides
mRNA: 1195 nucleotides
Protein:  298 amino acids
cDNA Status FLcDNA Available: AK221541
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (85%)
Model Genomes:  Danio rerio (59%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 249931_at
    
Mutant Information
Allele Symbol emb 1705-1emb 1705-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / SyngentaMeinke / Salk
Mutant Line Number 35154SALK_059852
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock CS16132CS24073
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence Details  (Help) 
Location of Mutation Intron 2Intron 2
Terminal Phenotype Transition  DetailsPreglobular  Details
Nomarski Phenotype   Images  Images
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release September, 2002March, 2004
Seed Color Pale Yellow-GreenWhite
Embryo Color Pale Yellow-GreenWhite
Percent Mutant Seeds 26.2 %22.9 %
Chi - Square 0.81.3
Seeds Counted 1059622
Percent Top Half 49.8 %48.3 %
Chi - Square <0.10.2
Average Seed Length 510 ± 50 µm310 ± 70 µm
Average Embryo Length 40 ± 60 µm15 ± 0 µm